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Tools to enable structural systems biology

Project Description

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## ssbio This Python package provides a collection of tools for people with questions in the realm of structural systems biology. The main goals of this package are to:

  1. Provide an easy way to map proteins to sequences and structures
  2. Directly link structures to genome-scale SBML models
  3. Prepare structures for downstream analyses, such as their use in molecular modeling software

##### Example questions you can answer with this package:

  • How can I determine the number of protein structures available for my list of genes?
  • What is the best, representative structure for my protein?
  • Where, in a metabolic network, do these proteins work?
  • Where do popular mutations show up on a protein?
  • How can I compare the structural features of an entire proteome?
  • and more…

## Documentation Read the documentation [here](http://ssbio.readthedocs.io/en/latest/).

## Quick install

First install NGLview: `bash pip install nglview `

Then install ssbio: `bash pip install ssbio `

Updating `bash pip install ssbio --upgrade `

Uninstalling `bash pip uninstall ssbio `

### External programs to install See: [Software Installations](https://github.com/SBRG/ssbio/wiki/Software-Installations)

Release History

Release History

This version
History Node

0.9.5

History Node

0.9.0

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File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
ssbio-0.9.5.tar.gz (140.9 kB) Copy SHA256 Checksum SHA256 Source Jun 21, 2017

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